The detailed information of tRNA gene sequence


Sequence ID>WENV170429237
Genome IDCEUR01040705
Search identical group
Phylum/Class[CEUR] marine metagenome genome assembly TARA_123_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 628
End posion on genome 553
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
ttttcgtatt
tRNA gene sequence
GGCAACGTAGCTCAGGGGTCAGAGCGGGGTCTTCATAAGGCCTAGGTCGGAGGTTCAAAT
CCTCCCGTTGCCACCA
Downstream region at tRNA end position
ttatttctct
Secondary structure (Cloverleaf model)
>WENV170429237	Met	CAT
                   t      ACCA ttatttctct
                     G - C
                     G - C
                     C - G
                     A - T
                     A - T
                     C - G
                     G - C          T A
                    T     C C T C C     A
      G G A        A      | | | | |     A
    G       C T C G       G G A G G     C
    G       | | | |                 T T
    T       G A G C
      C A          G     AGGTC
                    G + T
                    G - C
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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