The detailed information of tRNA gene sequence


Sequence ID>WENV170438434
Genome IDCEUU01121603
Search identical group
Phylum/Class[CEUU] marine metagenome genome assembly TARA_122_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 395
End posion on genome 308
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ctgtcacctt
tRNA gene sequence 
GGAGCGGTGGCCGAGTGGCTGAAGGCGCACGCTTGGAAAGCGTGTGTACCGCAAGGTACC
GGGGGTTCGAATCCCCCTCGCTCCGCCA
Downstream region at tRNA end position 
tctcgcaatc
Secondary structure (Cloverleaf model)
>WENV170438434	Ser	GGA
                   t      GCCA tctcgcaatc
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G + T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TGTACCGCAAGGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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