The detailed information of tRNA gene sequence


Sequence ID>WENV170438453
Genome IDCEUU01129049
Search identical group
Phylum/Class[CEUU] marine metagenome genome assembly TARA_122_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 400
End posion on genome 327
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
attccaacat
tRNA gene sequence 
GGCCCGCTGGCAGATTGGTTATGCAGAGGACTGCAAATCCTTGTAGCTCGGTTCGATTCC
GGGGTGGGCCTCCA
Downstream region at tRNA end position 
ctaattcatt
Secondary structure (Cloverleaf model)
>WENV170438453	Cys	GCA
                   t      TCCA ctaattcatt
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G + T
                     C - G          T T
                    T     G G G C C     A
        T A        G      | + | | |     G
      T     G A C G       C T C G G     C
      G       | | |                 T T
      G     A T G C
        T T        A     GTAG
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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