The detailed information of tRNA gene sequence


Sequence ID>WENV170444338
Genome IDCEUX01093900
Search identical group
Phylum/Class[CEUX] marine metagenome genome assembly TARA_123_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 3175
End posion on genome 3102
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position
gatagtttaa
tRNA gene sequence
AGACGGATAGTGTAACGGTAGCACAATAAGCTCCAACCTTATTAGTCTGGGTTCAAATCC
TAGTTCGTCTGCCA
Downstream region at tRNA end position
agaattcgtt
Secondary structure (Cloverleaf model)
>WENV170444338	Trp	CCA
                   a      GCCA agaattcgtt
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C
                     G + T
                     A - T          T A
                    T     G A T C C     A
        A A        A      | | + | |     A
      C     T G T G       C T G G G     C
      G     + | | |                 T T
      G     G C A C
        T A        A     TAGT
                    A - T
                    T - A
                    A - T
                    A - T
                    G - C
                  C       C
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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