The detailed information of tRNA gene sequence


Sequence ID>WENV170447513
Genome IDCEUY01257760
Search identical group
Phylum/Class[CEUY] marine metagenome genome assembly TARA_123_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 283
End posion on genome 190
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position
tgtttttaaA
tRNA gene sequence
GGAAGGAAATCTTCTCCGGTGAGAAGCCCGGACTTCAAATCCGGAGAGAGACGTTATACG
TTTCTGGTGGGTTCGACTCCTGCTCCTTCCGCCa
Downstream region at tRNA end position
tagcagctat
Secondary structure (Cloverleaf model)
>WENV170447513	SeC(p)	TCA
                   A      GCCa tagcagctat
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     A - T          T C
                    A     C G T C C     A
      C T C        A      | + + | |     G
    C       T T C T       G T G G G     C
    G       + |   +                 T T
    G       G A A G
      T G A        C     AGAGAGACGTTATACGTTTCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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