The detailed information of tRNA gene sequence


Sequence ID>WENV170463539
Genome IDCEVD01153521
Search identical group
Phylum/Class[CEVD] marine metagenome genome assembly TARA_123_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 303
End posion on genome 226
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
tccgcttcat
tRNA gene sequence
GGCTATGTAGCTCAGCTGGTTTAGAGCGCAGCATTCATAATGCTGAGGTCGGTAGTTCAA
GTCTACCCATAGCCACCA
Downstream region at tRNA end position
tgcttgttta
Secondary structure (Cloverleaf model)
>WENV170463539	Met	CAT
                   t      ACCA tgcttgttta
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T
                     T - A
                     G - C          T G
                    T     C C A T C     A
    T C G A        A      | | | | |     A
  G         C T C G       G G T A G     C
  G         | | | |                 T T
  T         G A G C
    T T A          G     AGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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