The detailed information of tRNA gene sequence


Sequence ID>WENV170465049
Genome IDCEVD01373152
Search identical group
Phylum/Class[CEVD] marine metagenome genome assembly TARA_123_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 158
End posion on genome 247
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cccctattct
tRNA gene sequence 
GGACAGGTGTCTGAGTGGTTTAAGGAGCACGCTTGGAAAGCGTGTGTGCGAGAAATCGTA
CCGTGGGTTCGAATCCCACCCTGTCCGCCA
Downstream region at tRNA end position 
tttttatcta
Secondary structure (Cloverleaf model)
>WENV170465049	Ser	GGA
                   t      GCCA tttttatcta
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C T       G T G G G     C
    G         + | |                 T T
    T       A G G A
      T T A        G     TGTGCGAGAAATCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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