The detailed information of tRNA gene sequence


Sequence ID>WENV170476697
Genome IDCEVI01172106
Search identical group
Phylum/Class[CEVI] marine metagenome genome assembly TARA_142_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 528
End posion on genome 625
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
agaagagtta
tRNA gene sequence 
GGGAGCGGATGGCGGTCTGGTGGCCCCACTGGTCTTCAAAACCAGCTTGCCGAGCTAAAT
CCTCGGTTGGTGGGTTCGATTCCCACACGTTCCCGCCA
Downstream region at tRNA end position 
tcttctgatn
Secondary structure (Cloverleaf model)
>WENV170476697	SeC(p)	TCA
                   a      GCCA tcttctgatn
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     C - G
                     G - C
                     G   A          T T
                    A     C A C C C     A
      C T G        T      | | | | |     G
    T       G C G G       G T G G G     C
    G       |   | |                 T T
    G       C C C C
      T G G        A     CTTGCCGAGCTAAATCCTCGGTTG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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