The detailed information of tRNA gene sequence


Sequence ID>WENV170477441
Genome IDCEVJ01074126
Search identical group
Phylum/Class[CEVJ] marine metagenome genome assembly TARA_146_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 2050
End posion on genome 1954
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
acagcgcgaT
tRNA gene sequence 
GGAAGGGAATCGTCCCCGGTGGGGCGGCCGGACTTCAAATCCGGTTGGGGCAGCGAGCCT
GTCCCGGGTGGGTTCGACTCCCATTCCCTTCCGCC
Downstream region at tRNA end position 
Agaaaagcgg
Secondary structure (Cloverleaf model)
>WENV170477441	SeC(p)	TCA
                   T      CGCC Agaaaagcgg
                     G - C
                     G + T
                     A - T
                     A   C
                     G - C
                     G - C
                     G + T          T C
                    A     T A C C C     A
      C C C        A      + | | | |     G
    C       T G C T       G T G G G     C
    G       +     +                 T T
    G       G G C G
      T G G        G     TTGGGGCAGCGAGCCTGTCCCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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