The detailed information of tRNA gene sequence


Sequence ID>WENV170478538
Genome IDCEVK01062413
Search identical group
Phylum/Class[CEVK] marine metagenome genome assembly TARA_149_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 204
End posion on genome 128
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position
gattcggaac
tRNA gene sequence
GGGGCTATAGCTCAGTTGGTTAGAGCGCACCTCTGATAAGGGTGAGGTCGCTGGTTCGAA
TCCAGCTAGCCCCACGA
Downstream region at tRNA end position
catgcggact
Secondary structure (Cloverleaf model)
>WENV170478538	Ile	GAT
                   c      ACGA catgcggact
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T          T A
                    T     C G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    T + G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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