The detailed information of tRNA gene sequence


Sequence ID>WENV170478755
Genome IDCEVK01088763
Search identical group
Phylum/Class[CEVK] marine metagenome genome assembly TARA_149_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 240
End posion on genome 315
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position
aaagataatc
tRNA gene sequence
GGATCGGTCGTCTAGCTTGGCTTGGATGACGCACTCACACTGCGTAGGTCATGGGTTCAA
ATCCCATTCGATCCACtt
Downstream region at tRNA end position
caatggttaa
Secondary structure (Cloverleaf model)
>WENV170478755	Val	CAC
                   c      ACtt caatggttaa
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     G - C
                     G + T          T A
                    T     T A C C C     A
    T C G A        C      | | | | |     A
  T         T C T G       A T G G G     C
  G         + | | +                 T T
  G         G G A T
    C T T          G     AGGTC
                    A - T
                    C - G
                    G - C
                    C - G
                    A - T
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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