The detailed information of tRNA gene sequence


Sequence ID>WENV170481459
Genome IDCEVL01191150
Search identical group
Phylum/Class[CEVL] marine metagenome genome assembly TARA_146_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 503
End posion on genome 427
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position
nnnnnncctt
tRNA gene sequence
GCGCTCGTAGCTCAGCTGGATAGAGTGTCGCCCTCCGAAGGCGAAGGTCGTGGGTTCGAA
TCCCGCCGAGCGCGCCA
Downstream region at tRNA end position
ttcattttct
Secondary structure (Cloverleaf model)
>WENV170481459	Arg	CCG
                   t      GCCA ttcattttct
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G T G G G     C
    G       | | | +                 T T
    G       G A G T
      A T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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