The detailed information of tRNA gene sequence


Sequence ID>WENV170483700
Genome IDCEVM01147728
Search identical group
Phylum/Class[CEVM] marine metagenome genome assembly TARA_145_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 131
End posion on genome 56
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
cttcacccaa
tRNA gene sequence 
GCACGGGTAACAAAGCCTGGCTATGTGCGGGACTGCAAATCCTGATACCTGGGTTCGAAT
CCCGGCCCGTGCTCCA
Downstream region at tRNA end position 
ctctcattcc
Secondary structure (Cloverleaf model)
>WENV170483700	Cys	GCA
                   a      TCCA ctctcattcc
                     G - C
                     C - G
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | + | | |     G
    C       A A C A       C T G G G     C
    T         | | |                 T T
    G       A T G T
      G C T        G     ATAC
                    C - G
                    G + T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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