The detailed information of tRNA gene sequence


Sequence ID>WENV170495126
Genome IDCEVR01162627
Search identical group
Phylum/Class[CEVR] marine metagenome genome assembly TARA_148_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 412
End posion on genome 504
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
tttgatttag
tRNA gene sequence
GGAGGAATCGCATAGTGGCCTAGTGCGCCCGCCTGCTAAGCGGGTTGGGGGTGATGAGCT
CCCTCGTGGGTTCGAATCCCACTTCCTCCGCCA
Downstream region at tRNA end position
ttaaacaaat
Secondary structure (Cloverleaf model)
>WENV170495126	Ser	GCT
                   g      GCCA ttaaacaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     C A C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G T G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TTGGGGGTGATGAGCTCCCTC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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