The detailed information of tRNA gene sequence


Sequence ID>WENV170500270
Genome IDCEVU01001239
Search identical group
Phylum/Class[CEVU] marine metagenome genome assembly TARA_151_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 656
End posion on genome 561
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gaaataaatT
tRNA gene sequence 
GGACTGGTCGTCTAGTTTGGTTTGGATGACGCACTCACACTGCGTAAGGAAGAAATTCCC
GCAAAGGTCGTGGGTTCAAATCCCGCCCGGTCCATta
Downstream region at tRNA end position 
attaaaataa
Secondary structure (Cloverleaf model)
>WENV170500270	Val	CAC
                   T      ATta attaaaataa
                     G - C
                     G - C
                     A - T
                     C - G
                     T + G
                     G - C
                     G - C          T A
                    T     C G C C C     A
    T T G A        C      | + | | |     A
  T         T C T G       G T G G G     C
  G         + | | +                 T T
  G         G G A T
    T T T          G     AAGGAAGAAATTCCCGCAAAGGTC
                    A - T
                    C - G
                    G - C
                    C - G
                    A - T
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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