The detailed information of tRNA gene sequence


Sequence ID>WENV170504461
Genome IDCEVV01285682
Search identical group
Phylum/Class[CEVV] marine metagenome genome assembly TARA_152_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 31
End posion on genome 122
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
ttaaacaata
tRNA gene sequence
GGAGAGTTCGCATAGAGGCCTAGTGCGTCGGTTTGCTAAACCGATGTCGGAATTATTTCC
GACCATGGGTTCGAATCCCATACTCTCCGCCA
Downstream region at tRNA end position
tataaggaat
Secondary structure (Cloverleaf model)
>WENV170504461	Ser	GCT
                   a      GCCA tataaggaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     T A C C C     A
      A G A        C      | | | | |     G
    G       T A C G       A T G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TGTCGGAATTATTTCCGACC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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