The detailed information of tRNA gene sequence


Sequence ID>WENV170505176
Genome IDCEVW01036287
Search identical group
Phylum/Class[CEVW] marine metagenome genome assembly TARA_149_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 289
End posion on genome 215
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gtattataac
tRNA gene sequence 
GCACCGTTGGTCTAGTTGGTTATGACGCTCGCCTCACACGCGAGAGGTCTCCGGTTCGAA
CCCGGAATGGTGTACac
Downstream region at tRNA end position 
gatttttgat
Secondary structure (Cloverleaf model)
>WENV170505176	Val	CAC
                   c      ACac gatttttgat
                     G + T
                     C - G
                     A - T
                     C - G
                     C - G
                     G + T
                     T - A          C A
                    T     A G G C C     A
      T G A        G      | | | | |     G
    T       T C T G       T C C G G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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