The detailed information of tRNA gene sequence


Sequence ID>WENV170505912
Genome IDCEVW01116741
Search identical group
Phylum/Class[CEVW] marine metagenome genome assembly TARA_149_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 580
End posion on genome 499
Amino Acid Ser
Anticodon AGA
Upstream region at tRNA start position
acccctacaa
tRNA gene sequence
GCGGTCGTGCCCGAGCGGTTAAGGGGATCGACTAGAAATCGATTAGGCAATGCCTGCGCA
GGTTCGAGTCCTGTCGACCGCGtgt
Downstream region at tRNA end position
ttgacatctt
Secondary structure (Cloverleaf model)
>WENV170505912	Ser	AGA
                   a      Gtgt ttgacatctt
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          T G
                    T     T G T C C     A
      C G A        G      + | | | |     G
    G       G C C C       G C A G G     C
    G         | | |                 T T
    T       A G G G
      T A          G     TAGGCAATGCCTGC
                    A - T
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    A G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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