The detailed information of tRNA gene sequence


Sequence ID>WENV170506517
Genome IDCEVW01249943
Search identical group
Phylum/Class[CEVW] marine metagenome genome assembly TARA_149_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 453
End posion on genome 380
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position
agctctgttg
tRNA gene sequence
TGGAAAATAATTCAATAGGTTAGAATGTTAATTTGTCAAATTAAAAGCTGCAAGTTCAAA
TCTTGTTTTTCCAGtaa
Downstream region at tRNA end position
atttttattt
Secondary structure (Cloverleaf model)
>WENV170506517	Asp	GTC
                   g      Gtaa atttttattt
                     T - A
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     A - T          T A
                    T     T G T T C     A
      T A A        A      + | | | |     A
    A       C T T A       G C A A G     C
    G       | | | |                 T T
    G       G A A T
      T T A        G     AAGCT
                    T - A
                    T - A
                    A - T
                    A - T
                    T - A
                  T       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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