The detailed information of tRNA gene sequence


Sequence ID>WENV170506572
Genome IDCEVW01278653
Search identical group
Phylum/Class[CEVW] marine metagenome genome assembly TARA_149_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 355
End posion on genome 266
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaaccaattt
tRNA gene sequence 
TTAGATGTAGCTAAGTGTGGTTGAAAGCGACATTTTGCTAAAATGTTAAATATAAAAAAT
ATTTCGCAAGTTCAAATCTTGTCATCTAATaaa
Downstream region at tRNA end position 
attgctaatt
Secondary structure (Cloverleaf model)
>WENV170506572	Ser	GCT
                   t      Taaa attgctaatt
                     T - A
                     T - A
                     A - T
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T G T T C     A
    G T G A        A      + | | | |     A
  T         A T C G       G C A A G     C
  G           | | |                 T T
  G         A A G C
    T T G A        G     TAAATATAAAAAATATTTC
                    A - T
                    C - G
                    A - T
                    T - A
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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