The detailed information of tRNA gene sequence


Sequence ID>WENV170507259
Genome IDCEVX01031396
Search identical group
Phylum/Class[CEVX] marine metagenome genome assembly TARA_152_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 101
End posion on genome 176
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position
atattaaatT
tRNA gene sequence
TGGAAAATATTTCAATCGGTTAGAATATTAATTTGTCAAATTAAAGGTTGCAAGTTCAAA
TCTTGTTTTTCCAGGtt
Downstream region at tRNA end position
cttattcaat
Secondary structure (Cloverleaf model)
>WENV170507259	Asp	GTC
                   T      GGtt cttattcaat
                     T - A
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     A - T          T A
                    T     T G T T C     A
      T A A        A      + | | | |     A
    C       C T T T       G C A A G     C
    G       | | |                   T T
    G       G A A T
      T T A        A     AGGTT
                    T - A
                    T - A
                    A - T
                    A - T
                    T - A
                  T       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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