The detailed information of tRNA gene sequence


Sequence ID>WENV170510121
Genome IDCEVY01107096
Search identical group
Phylum/Class[CEVY] marine metagenome genome assembly TARA_065_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 820
End posion on genome 909
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position
gcatccattt
tRNA gene sequence
GGAGAGATGGCAGAGTCTGGTTTAATGCACCATCTTGGAAGGGTGGCGTACGGCAACGTA
CCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position
attttattaa
Secondary structure (Cloverleaf model)
>WENV170510121	Ser	GGA
                   t      GCCA attttattaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    C T G A        G      | | | | |     G
  T         G A C G       G A G G G     C
  G           | | |                 T T
  G         A T G C
    T T T A        A     CGTACGGCAACGTACC
                    C - G
                    C - G
                    A - T
                    T + G
                    C - G
                  T       G
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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