The detailed information of tRNA gene sequence


Sequence ID>WENV170510235
Genome IDCEVY01131167
Search identical group
Phylum/Class[CEVY] marine metagenome genome assembly TARA_065_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 547
End posion on genome 472
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position
nnnnnnngtt
tRNA gene sequence
GGCCCGTTCGTCTAGAGGCCTAGGACGCCGCCTTCTCAAGGCAGTAACGTAGGTTCGAAT
CCTGCACGGGCCACCA
Downstream region at tRNA end position
ttgaacaagc
Secondary structure (Cloverleaf model)
>WENV170510235	Glu	CTC
                   t      ACCA ttgaacaagc
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     C G T C C     A
      A G A        C      | + | | |     G
    G       T C T G       G T A G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        G     TAAC
                    C - G
                    C   A
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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