The detailed information of tRNA gene sequence


Sequence ID>WENV170516837
Genome IDCEWC01019707
Search identical group
Phylum/Class[CEWC] marine metagenome genome assembly TARA_036_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 682
End posion on genome 611
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
attcaaaaga
tRNA gene sequence 
GGGCGAATAGCTCAGCGGTAGAGCTACTCGTTTACACCGAGTCGGTCGGGGGTTCGATCC
CCTCTTCGCCCAtaa
Downstream region at tRNA end position 
taaataattg
Secondary structure (Cloverleaf model)
>WENV170516837	Val	TAC
                   a      Ataa taaataattg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T          C T
                    T     C T C C C     A
        G A        A      | + | | |     G
      C     C T C G       G G G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        T     CGGTC
                    A - T
                    C - G
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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