The detailed information of tRNA gene sequence


Sequence ID>WENV170518198
Genome IDCEWE01100356
Search identical group
Phylum/Class[CEWE] marine metagenome genome assembly TARA_124_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 222
End posion on genome 296
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position
aaagtcgcct
tRNA gene sequence
GCCCGTGTGGTGTAGCGGTTATCATGAGGCGTTGTCGATGCCTCGACCCGGGTTCGATTC
CCGGCACGGGCGCCT
Downstream region at tRNA end position
tttcagtcta
Secondary structure (Cloverleaf model)
>WENV170518198	Asp	GTC
                   t      GCCT tttcagtcta
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A
                     G - C          T T
                    T     G G C C C     A
      C G A        G      | | | | |     G
    G       T G T G       C C G G G     C
    G         | | +                 T T
    T       T C A T
      T A          G     CGAC
                    A - T
                    G - C
                    G - C
                    C - G
                    G + T
                  T       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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