The detailed information of tRNA gene sequence


Sequence ID>WENV170522953
Genome IDCEWG01148552
Search identical group
Phylum/Class[CEWG] marine metagenome genome assembly TARA_102_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 264
End posion on genome 189
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position
gggcagtctt
tRNA gene sequence
GGACGTATAGTGTAGTTGGATATCACTCTGGCCTTCTAAGCCGGCGACCCGGGTTCGAAT
CCTGGTACGTCCGCCA
Downstream region at tRNA end position
ccttcaaagg
Secondary structure (Cloverleaf model)
>WENV170522953	Arg	TCT
                   t      GCCA ccttcaaagg
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     T - A
                     A - T          T A
                    T     G G T C C     A
      T G A        A      | | + | |     G
    T       T G T G       C C G G G     C
    G         | | |                 T T
    G       T C A C
      A T A        T     CGAC
                    C - G
                    T + G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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