The detailed information of tRNA gene sequence


Sequence ID>WENV170523507
Genome IDCEWG01212765
Search identical group
Phylum/Class[CEWG] marine metagenome genome assembly TARA_102_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 54
End posion on genome 129
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttgtactaat
tRNA gene sequence 
AGGAGTGTAGTGTCAACGGCTAGCACATCGGATTCCAAACCCGAAAGTGGCAGTTCAACT
CTGTCCACTCCTGCCA
Downstream region at tRNA end position 
ttcaagaagg
Secondary structure (Cloverleaf model)
>WENV170523507	Trp	CCA
                   t      GCCA ttcaagaagg
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T C
                    T     C T G T C     A
      A A C        A      | + | | |     A
    C       T G T G       G G C A G     C
    G       + | | |                 T T
    G       G C A C
      C T A        A     AAGT
                    T - A
                    C - G
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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