The detailed information of tRNA gene sequence


Sequence ID>WENV170523797
Genome IDCEWG01248339
Search identical group
Phylum/Class[CEWG] marine metagenome genome assembly TARA_102_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 238
End posion on genome 311
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position
gatcaacggg
tRNA gene sequence
CGGGATGTAGCACAGCTTGGTAGTGCGCCTGGTTTGGGACCAGGAGGTCGCTGGTTCGAA
TCCAGTCATCCCGAttc
Downstream region at tRNA end position
ctccgctaca
Secondary structure (Cloverleaf model)
>WENV170523797	Pro	TGG
                   g      Attc ctccgctaca
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T G A C C     A
      C G A        A      + | | | |     G
    T       C A C G       G C T G G     C
    T       | | | |                 T T
    G       G T G C
      G T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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