The detailed information of tRNA gene sequence


Sequence ID>WENV170525378
Genome IDCEWH01117521
Search identical group
Phylum/Class[CEWH] marine metagenome genome assembly TARA_109_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 243
End posion on genome 153
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position
gtagtattgT
tRNA gene sequence
CTCGATTTAGCTCAGTTGGTAGAGCGTTGGACTGTAATGGTAATATAGTGGTAATCCACA
GGTCGCTGGTTCGATTCCAGCAATCGAGATag
Downstream region at tRNA end position
ggggtgtagc
Secondary structure (Cloverleaf model)
>WENV170525378	Tyr	GTA
                   T      ATag ggggtgtagc
                     C - G
                     T - A
                     C - G
                     G - C
                     A - T
                     T - A
                     T - A          T T
                    T     C G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     TATAGTGGTAATCCACAGGTC
                    T - A
                    T - A
                    G + T
                    G   G
                    A   G
                  C       T
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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