The detailed information of tRNA gene sequence


Sequence ID>WENV170525869
Genome IDCEWH01245335
Search identical group
Phylum/Class[CEWH] marine metagenome genome assembly TARA_109_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 530
End posion on genome 455
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position
agcttcctag
tRNA gene sequence
GGTCCTGTAACTCAGTTGGTAGAGTGTCTCCCTTACAAGGAGAAAGTCACAAGTTCGAGT
CTTGTCGGGACCACCA
Downstream region at tRNA end position
cgaaaccacc
Secondary structure (Cloverleaf model)
>WENV170525869	Val	TAC
                   g      ACCA cgaaaccacc
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     T G T T C     A
      T G A        A      | | | | |     G
    T       C T C A       A C A A G     C
    G       | | | |                 T T
    G       G A G T
      T A          G     AAGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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