The detailed information of tRNA gene sequence


Sequence ID>WENV170527436
Genome IDCEWI01161204
Search identical group
Phylum/Class[CEWI] marine metagenome genome assembly TARA_111_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 406
End posion on genome 331
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position
acaggcttcc
tRNA gene sequence
GGGGCCTTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAACGGTTCGAAT
CCGTTAGGCTCCACCA
Downstream region at tRNA end position
tttccccgac
Secondary structure (Cloverleaf model)
>WENV170527436	Ala	TGC
                   c      ACCA tttccccgac
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     T - A          T A
                    T     T T G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A A C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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