The detailed information of tRNA gene sequence


Sequence ID>WENV170528350
Genome IDCEWJ01036611
Search identical group
Phylum/Class[CEWJ] marine metagenome genome assembly TARA_128_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 205
End posion on genome 114
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
agaaatttaa
tRNA gene sequence 
GGAAGCGAGAGTGATCTGGTGATTACCACGGCCTTCAAAGCCGTTGAGTGGCGTTAGTCA
TTGGTGGGTTCGATTCCCACACGTTTCCGCCA
Downstream region at tRNA end position 
attaacgaga
Secondary structure (Cloverleaf model)
>WENV170528350	SeC	TCA
                   a      GCCA attaacgaga
                     G - C
                     G - C
                     A - T
                     A - T
                     G + T
                     C - G
                     G - C
                     A   A          T T
                    G     C A C C C     A
      T C T        A      | | | | |     G
    G       A G T G       G T G G G     C
    G       | + | |                 T T
    T       T T A C
      G A          C     TGAGTGGCGTTAGTCATTG
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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