The detailed information of tRNA gene sequence


Sequence ID>WENV170529187
Genome IDCEWJ01111050
Search identical group
Phylum/Class[CEWJ] marine metagenome genome assembly TARA_128_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 200
End posion on genome 116
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caacaaacat
tRNA gene sequence 
GCGGGGGTCGCCTAGCCTGGTAGGGCGTGGGATTGCTAATTCCATGTTCGCAAGAACACG
AGGGTTCGAATCCCTCTCCCCGCGCtt
Downstream region at tRNA end position 
tttcaattaa
Secondary structure (Cloverleaf model)
>WENV170529187	Ser	GCT
                   t      GCtt tttcaattaa
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C T C C C     A
      C G A        C      | | | | |     G
    C       T C C G       G A G G G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     TGTTCGCAAGAACAC
                    T - A
                    G - C
                    G - C
                    G + T
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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