The detailed information of tRNA gene sequence


Sequence ID>WENV170529371
Genome IDCEWJ01128160
Search identical group
Phylum/Class[CEWJ] marine metagenome genome assembly TARA_128_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1100
End posion on genome 1197
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gattttgtga
tRNA gene sequence 
GGAAGCACGCGGCTCACTGGTGGGGCCCTCGGACTTCAAATCCGATGTGAGGCGCTAGAA
CCGTCTCGGGTGGGTTCGATTCCCATGTGCTTCCGCCA
Downstream region at tRNA end position 
cattttcaaa
Secondary structure (Cloverleaf model)
>WENV170529371	SeC(p)	TCA
                   a      GCCA cattttcaaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     A - T
                     C - G          T T
                    G     T A C C C     A
      C A C        C      + | | | |     G
    T       T C G G       G T G G G     C
    G       + | | |                 T T
    G       G G C C
      T G G        C     TGTGAGGCGCTAGAACCGTCTCGG
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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