The detailed information of tRNA gene sequence


Sequence ID>WENV170530777
Genome IDCEWK01057279
Search identical group
Phylum/Class[CEWK] marine metagenome genome assembly TARA_132_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1066
End posion on genome 1142
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
attctaaatg
tRNA gene sequence
TGCGGGGTGGAGCAGTCTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGGGGGTTCAAA
TCCCTCCTCCGCAACCA
Downstream region at tRNA end position
agttaaactc
Secondary structure (Cloverleaf model)
>WENV170530777	Met	CAT
                   g      ACCA agttaaactc
                     T - A
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     A
    C       C G A G       G G G G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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