The detailed information of tRNA gene sequence


Sequence ID>WENV170534406
Genome IDCEWO01230219
Search identical group
Phylum/Class[CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 461
End posion on genome 538
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position
agtttcattt
tRNA gene sequence
GGCCCGGTGGTGTAGTTGGTCTAACATACCACACTGTCAATGTGGAGATCGGGGGTTCGA
ATCCCCTCCGGGTCGCCA
Downstream region at tRNA end position
tnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170534406	Asp	GTC
                   t      GCCA tnnnnnnnnn
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T C C C C     A
    T T G A        G      + | | | |     G
  G         T G T G       G G G G G     C
  G         | | | +                 T T
  T         A C A T
    C T A          A     AGATC
                    C - G
                    C - G
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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