The detailed information of tRNA gene sequence


Sequence ID>w014912
Genome IDAAOU01000004
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPhotobacterium sp. SKA34 [AAOU]
Start position on genome 20900
End posion on genome 20994
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
acacaaatga
tRNA gene sequence 
GGAAGAACGGCGTATCCGGTGATGCGTCCGGATTTCAAATCCGGGTAGGGCTGCCAGCAG
TCCTGGGTAGGTTCGACTCCTATGTTCTTCCGCCA
Downstream region at tRNA end position 
cttcattttt
Secondary structure (Cloverleaf model)
>w014912	SeC	TCA
                   a      GCCA cttcattttt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     A - T
                     C - G          T C
                    G     T A T C C     A
      C C T        G      + | | | |     G
    G       A T G C       G T A G G     C
    G       | + | |                 T T
    T       T G C G
      G A          T     GTAGGGCTGCCAGCAGTCCTGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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