The detailed information of tRNA gene sequence


Sequence ID>WENV170536469
Genome IDCEWP01181251
Search identical group
Phylum/Class[CEWP] marine metagenome genome assembly TARA_067_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 208
End posion on genome 119
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgtgtgacta
tRNA gene sequence 
GGAGAGTTGACCGAGAGGCTTATGGTGCTCGCTTGGAAAGCGTGTGTACGTTAACCCGTA
CCGAGGGTTCGAATCCCTCACTCTCCGCCA
Downstream region at tRNA end position 
ccctattttt
Secondary structure (Cloverleaf model)
>WENV170536469	Ser	GGA
                   a      GCCA ccctattttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G       + | | |                 T T
    C       T G G T
      T T A        G     TGTACGTTAACCCGTACC
                    C - G
                    T   T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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