The detailed information of tRNA gene sequence


Sequence ID>WENV170537302
Genome IDCEWQ01059249
Search identical group
Phylum/Class[CEWQ] marine metagenome genome assembly TARA_085_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 374
End posion on genome 300
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position
gctcacctat
tRNA gene sequence
GAGGATGTGACAGAGTGGCTTATGTAATGGACTGCAACTCCATGTACAAGGGTTCGATTC
CCTTCTTCCTCTCCA
Downstream region at tRNA end position
aatttatata
Secondary structure (Cloverleaf model)
>WENV170537302	Cys	GCA
                   t      TCCA aatttatata
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T   T
                     G - C          T T
                    T     T T C C C     A
      T G A        G      | | | | |     G
    G       G A C A       A A G G G     C
    G         | | |                 T T
    C       A T G T
      T T          A     GTAC
                    A - T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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