The detailed information of tRNA gene sequence


Sequence ID>WENV170538414
Genome IDCEWR01079198
Search identical group
Phylum/Class[CEWR] marine metagenome genome assembly TARA_085_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 199
End posion on genome 108
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
ggtacaacgc
tRNA gene sequence
GGAGGGATCGCATAGTGGTCTAGTGCGGGCGCCTGCTAAGCGCTTAGAGGCTTAACGGCT
TCTCCAGGGTTCGAATCCCTGTCCCTCCGCCA
Downstream region at tRNA end position
caaccaaaat
Secondary structure (Cloverleaf model)
>WENV170538414	Ser	GCT
                   c      GCCA caaccaaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G T C C C     A
      T G A        C      | | | | |     G
    G       T A C G       C A G G G     C
    G       + | | |                 T T
    T       G T G C
      C T A        G     TAGAGGCTTAACGGCTTCTC
                    G + T
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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