The detailed information of tRNA gene sequence


Sequence ID>WENV170542931
Genome IDCXQK01003433
Search identical group
Phylum/Class[CXQK] human gut metagenome genome assembly hC5, contig hC5_contig005179.; ENVO:feces
Species
Start position on genome 525
End posion on genome 435
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ctcctatctT
tRNA gene sequence 
GGAGAGTTGTCCGAGTGGCCGAAGGAGCATGATTGGAAATCATGTAGGCGGGTATTCCTG
TCTCAAGGGTTCGAATCCCTTACTCTCCGTag
Downstream region at tRNA end position 
caatgttttt
Secondary structure (Cloverleaf model)
>WENV170542931	Ser	GGA
                   T      GTag caatgttttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     T T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       A A G G G     C
    G         | | |                 T T
    C       A G G A
      C G A        G     TAGGCGGGTATTCCTGTCTC
                    C - G
                    A - T
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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