The detailed information of tRNA gene sequence


Sequence ID>WENV170551023
Genome IDCXWF01069339
Search identical group
Phylum/Class[CXWF] marine metagenome genome assembly TARA_064_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 358
End posion on genome 283
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
acatattttc
tRNA gene sequence
GGGCCTTTAGTTCAGTGGTCAGAGCGCCCCGCTCATAACGGGATAGTCGTCGGTTCAAAT
CCGACAAGGCCCACCA
Downstream region at tRNA end position
tttattttca
Secondary structure (Cloverleaf model)
>WENV170551023	Met	CAT
                   c      ACCA tttattttca
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A          T A
                    T     C A G C C     A
      T G A        A      | | | | |     A
    G       C T T G       G T C G G     C
    G       | | + |                 T T
    T       G A G C
      C A          G     TAGTC
                    C   A
                    C - G
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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