The detailed information of tRNA gene sequence


Sequence ID>WENV170551080
Genome IDCXWJ01000012
Search identical group
Phylum/Class[CXWJ] wastewater metagenome; activated sludge
Species
Start position on genome 21289
End posion on genome 21382
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcgcgcaaaa
tRNA gene sequence 
GGAGGATAGGCAGATATCGGTTTGCTGCGCTGCACTGCTAACGCAGTTCCCGACGAAAGT
TGGGATGAGGGTTCGAGTCCCTTGTCCTCCGCGA
Downstream region at tRNA end position 
ttgtacggtg
Secondary structure (Cloverleaf model)
>WENV170551080	Ser	GCT
                   a      GCGA ttgtacggtg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T + G          T G
                    A     T T C C C     A
    T A T A        G      + | | | |     G
  C         G A C G       G A G G G     C
  G         | | | |                 T T
  G         C T G C
    T T T G        G     TTCCCGACGAAAGTTGGGAT
                    C - G
                    T - A
                    G - C
                    C - G
                    A   C
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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