The detailed information of tRNA gene sequence


Sequence ID>WENV170551225
Genome IDCXWJ01001647
Search identical group
Phylum/Class[CXWJ] wastewater metagenome; activated sludge
Species
Start position on genome 1155
End posion on genome 1067
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
aataagtgtc
tRNA gene sequence 
ACTCGGGTGGTGGAACTGGTAGACACGCAGGACTTAAAATCCTGTTCGCAGTAATGCGAG
TGACGGTTCAATTCCGTTCCCGAGTACTA
Downstream region at tRNA end position 
ttttagccga
Secondary structure (Cloverleaf model)
>WENV170551225	Leu	TAA
                   c      ACTA ttttagccga
                     A - T
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C
                     G - C          T T
                    T     T T G C C     A
      C A A        G      + | | | |     A
    T       G G T G       G A C G G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TTCGCAGTAATGCGAGT
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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