The detailed information of tRNA gene sequence


Sequence ID>WENV170552028
Genome IDCXWJ01035263
Search identical group
Phylum/Class[CXWJ] wastewater metagenome; activated sludge
Species
Start position on genome 3524
End posion on genome 3432
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccgcgcacct
tRNA gene sequence 
GGAGGTGTCGCCTAGTCCGGTCTATGGCGCCCGCCTGCTAAGCGGGTTTCGGGGTTAACC
CGATCGCGAGTTCAAATCTCGCCGCCTCCGCCA
Downstream region at tRNA end position 
tgacaagggg
Secondary structure (Cloverleaf model)
>WENV170552028	Ser	GCT
                   t      GCCA tgacaagggg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     C G C T C     A
    C T G A        C      | | | | |     A
  C         T C C G       G C G A G     C
  G           | | |                 T T
  G         T G G C
    T C T A        G     TTTCGGGGTTAACCCGATC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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