The detailed information of tRNA gene sequence


Sequence ID>WENV170552447
Genome IDCXWK01000038
Search identical group
Phylum/Class[CXWK] wastewater metagenome; activated sludge
Species
Start position on genome 191444
End posion on genome 191539
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ggcagagcgt
tRNA gene sequence 
GGAGGCGATCGAGTTCCTGGTGGGCTCCCCGGTCTTCAAAACCGTGCGGCACCTGAGTTC
AGGTGCGGGGGGTTCGATTCCCCTTCGCCTCCGCCA
Downstream region at tRNA end position 
cgcgagcgga
Secondary structure (Cloverleaf model)
>WENV170552447	SeC	TCA
                   t      GCCA cgcgagcgga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T          T T
                    T     T C C C C     A
      C C T        C      + | | | |     G
    T       T G A G       G G G G G     C
    G       + | | |                 T T
    G       G C T C
      T G G        C     GCGGCACCTGAGTTCAGGTGCG
                    C   T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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