The detailed information of tRNA gene sequence


Sequence ID>WENV170552934
Genome IDCXWK01004147
Search identical group
Phylum/Class[CXWK] wastewater metagenome; activated sludge
Species
Start position on genome 5809
End posion on genome 5712
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gaaccccggg
tRNA gene sequence 
GGAAGCTCCCGGGGCCCGGTGGCCCTCCCGGTCTTCAAAACCGGCCGCTCCCCGCCTCCG
GCGGGAAGGGTGGGTTCGACTCCCACGAGCTTCCGCCA
Downstream region at tRNA end position 
actccaccgc
Secondary structure (Cloverleaf model)
>WENV170552934	SeC(p)	TCA
                   g      GCCA actccaccgc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     T - A
                     C - G          T C
                    C     C A C C C     A
      C C C        C      | | | | |     G
    G       G G G G       G T G G G     C
    G       | | | +                 T T
    T       C C C T
      G G          C     CCGCTCCCCGCCTCCGGCGGGAAGG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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