The detailed information of tRNA gene sequence


Sequence ID>WENV170553227
Genome IDCXWK01011471
Search identical group
Phylum/Class[CXWK] wastewater metagenome; activated sludge
Species
Start position on genome 748
End posion on genome 653
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tcacagtcgt
tRNA gene sequence 
GGAGGTGTCCGGGTACCTGGTGGGCCCCCCCGCCTTCAAAGCGGGTGGGACGGGCGATCC
CCGTCCGGCGGGTTCGATTCCCGTCCACCTCCGCCA
Downstream region at tRNA end position 
cacgcaatcg
Secondary structure (Cloverleaf model)
>WENV170553227	SeC	TCA
                   t      GCCA cacgcaatcg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     T   C          T T
                    C     T G C C C     A
      C C A        C      + | | | |     G
    T       T G G G       G C G G G     C
    G       + | | |                 T T
    G       G C C C
      T G G        C     TGGGACGGGCGATCCCCGTCCG
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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