The detailed information of tRNA gene sequence


Sequence ID>WENV170553618
Genome IDCXWK01025604
Search identical group
Phylum/Class[CXWK] wastewater metagenome; activated sludge
Species
Start position on genome 76683
End posion on genome 76772
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tagatgtatt
tRNA gene sequence 
GGAGGCGTCGCATAGTGGTCTAGTGCACCACCTTGGAAAGGTGGCAGGCTCGAAAGGGTC
TCGAGAGTTCAAATCTCTCCGCCTCCGCCA
Downstream region at tRNA end position 
aagtttaaat
Secondary structure (Cloverleaf model)
>WENV170553618	Ser	GGA
                   t      GCCA aagtttaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T C T C     A
      T G A        C      | | | | |     A
    G       T A C G       G A G A G     C
    G       + | | |                 T T
    T       G T G C
      C T A        A     CAGGCTCGAAAGGGTCTC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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