The detailed information of tRNA gene sequence


Sequence ID>WENV170554343
Genome IDCXWK01063174
Search identical group
Phylum/Class[CXWK] wastewater metagenome; activated sludge
Species
Start position on genome 46341
End posion on genome 46252
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tataaacaaa
tRNA gene sequence 
GGAGAGATGCGAGAGCGGTTTAATCGGCAGTCCTGGAAAGACTGTGTATCCGCAAGGGTA
CCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
cgatatgaaa
Secondary structure (Cloverleaf model)
>WENV170554343	Ser	GGA
                   a      GCCA cgatatgaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G A G C       G A G G G     C
    G         | | |                 T T
    T       A T C G
      T T A        G     TGTATCCGCAAGGGTACC
                    C - G
                    A - T
                    G - C
                    T - A
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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